CDS

Accession Number TCMCG029C04838
gbkey CDS
Protein Id XP_023750066.1
Location join(677680..677801,678615..678715,678930..679102,679181..679412,679507..679625,679934..679990,680078..680262,680338..680482,680570..680653,680740..680803,681008..681018)
Gene LOC111898378
GeneID 111898378
Organism Lactuca sativa

Protein

Length 430aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA432228
db_source XM_023894298.1
Definition DEAD-box ATP-dependent RNA helicase 56 isoform X1 [Lactuca sativa]

EGGNOG-MAPPER Annotation

COG_category A
Description DEAD-box ATP-dependent RNA helicase
KEGG_TC -
KEGG_Module M00406        [VIEW IN KEGG]
M00430        [VIEW IN KEGG]
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko00002        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
ko03019        [VIEW IN KEGG]
ko03041        [VIEW IN KEGG]
KEGG_ko ko:K12812        [VIEW IN KEGG]
EC 3.6.4.13        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway ko03013        [VIEW IN KEGG]
ko03015        [VIEW IN KEGG]
ko03040        [VIEW IN KEGG]
ko05164        [VIEW IN KEGG]
map03013        [VIEW IN KEGG]
map03015        [VIEW IN KEGG]
map03040        [VIEW IN KEGG]
map05164        [VIEW IN KEGG]
GOs GO:0000003        [VIEW IN EMBL-EBI]
GO:0000375        [VIEW IN EMBL-EBI]
GO:0000377        [VIEW IN EMBL-EBI]
GO:0000398        [VIEW IN EMBL-EBI]
GO:0003006        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003677        [VIEW IN EMBL-EBI]
GO:0003690        [VIEW IN EMBL-EBI]
GO:0003697        [VIEW IN EMBL-EBI]
GO:0003723        [VIEW IN EMBL-EBI]
GO:0003724        [VIEW IN EMBL-EBI]
GO:0003725        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0004004        [VIEW IN EMBL-EBI]
GO:0004386        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005681        [VIEW IN EMBL-EBI]
GO:0005730        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005911        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006396        [VIEW IN EMBL-EBI]
GO:0006397        [VIEW IN EMBL-EBI]
GO:0006403        [VIEW IN EMBL-EBI]
GO:0006405        [VIEW IN EMBL-EBI]
GO:0006406        [VIEW IN EMBL-EBI]
GO:0006611        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006810        [VIEW IN EMBL-EBI]
GO:0006886        [VIEW IN EMBL-EBI]
GO:0006913        [VIEW IN EMBL-EBI]
GO:0006950        [VIEW IN EMBL-EBI]
GO:0006974        [VIEW IN EMBL-EBI]
GO:0007275        [VIEW IN EMBL-EBI]
GO:0008026        [VIEW IN EMBL-EBI]
GO:0008104        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0008186        [VIEW IN EMBL-EBI]
GO:0008380        [VIEW IN EMBL-EBI]
GO:0009506        [VIEW IN EMBL-EBI]
GO:0009555        [VIEW IN EMBL-EBI]
GO:0009791        [VIEW IN EMBL-EBI]
GO:0009908        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010035        [VIEW IN EMBL-EBI]
GO:0010038        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0010468        [VIEW IN EMBL-EBI]
GO:0010501        [VIEW IN EMBL-EBI]
GO:0015031        [VIEW IN EMBL-EBI]
GO:0015833        [VIEW IN EMBL-EBI]
GO:0015931        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0016071        [VIEW IN EMBL-EBI]
GO:0016462        [VIEW IN EMBL-EBI]
GO:0016787        [VIEW IN EMBL-EBI]
GO:0016817        [VIEW IN EMBL-EBI]
GO:0016818        [VIEW IN EMBL-EBI]
GO:0016887        [VIEW IN EMBL-EBI]
GO:0017111        [VIEW IN EMBL-EBI]
GO:0019222        [VIEW IN EMBL-EBI]
GO:0022414        [VIEW IN EMBL-EBI]
GO:0030054        [VIEW IN EMBL-EBI]
GO:0031503        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0032501        [VIEW IN EMBL-EBI]
GO:0032502        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0033036        [VIEW IN EMBL-EBI]
GO:0033554        [VIEW IN EMBL-EBI]
GO:0034613        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0042221        [VIEW IN EMBL-EBI]
GO:0042623        [VIEW IN EMBL-EBI]
GO:0042886        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043228        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043232        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0045184        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0046686        [VIEW IN EMBL-EBI]
GO:0046907        [VIEW IN EMBL-EBI]
GO:0048229        [VIEW IN EMBL-EBI]
GO:0048367        [VIEW IN EMBL-EBI]
GO:0048437        [VIEW IN EMBL-EBI]
GO:0048438        [VIEW IN EMBL-EBI]
GO:0048443        [VIEW IN EMBL-EBI]
GO:0048466        [VIEW IN EMBL-EBI]
GO:0048608        [VIEW IN EMBL-EBI]
GO:0048653        [VIEW IN EMBL-EBI]
GO:0048731        [VIEW IN EMBL-EBI]
GO:0048827        [VIEW IN EMBL-EBI]
GO:0048856        [VIEW IN EMBL-EBI]
GO:0050657        [VIEW IN EMBL-EBI]
GO:0050658        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051028        [VIEW IN EMBL-EBI]
GO:0051168        [VIEW IN EMBL-EBI]
GO:0051169        [VIEW IN EMBL-EBI]
GO:0051179        [VIEW IN EMBL-EBI]
GO:0051234        [VIEW IN EMBL-EBI]
GO:0051236        [VIEW IN EMBL-EBI]
GO:0051641        [VIEW IN EMBL-EBI]
GO:0051649        [VIEW IN EMBL-EBI]
GO:0051716        [VIEW IN EMBL-EBI]
GO:0055044        [VIEW IN EMBL-EBI]
GO:0060255        [VIEW IN EMBL-EBI]
GO:0061458        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0070035        [VIEW IN EMBL-EBI]
GO:0070727        [VIEW IN EMBL-EBI]
GO:0071166        [VIEW IN EMBL-EBI]
GO:0071426        [VIEW IN EMBL-EBI]
GO:0071427        [VIEW IN EMBL-EBI]
GO:0071702        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071705        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0090567        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:0099402        [VIEW IN EMBL-EBI]
GO:0140098        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]
GO:1990904        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGGCGAAACAGAGATGAAGGATACTGACGCTTACGAGGAGGAGCTTCTCGACTACGAAGAGGAGGACGAGAAGGCCCCTGATTCAGCCGGTGTTAAAGTCAACGGCGAAGCCGTTAAGAAGGGCTATGTAGGAATTCACAGTTCCGGATTTAGAGATTTTCTTTTGAAGCCAGAGCTACTTCGTGCTATTGTGGATTCAGGATTTGAACATCCTTCCGAAGTGCAACACGAATGCATCCCTCAAGCTATTTTGGGCATGGATGTCATTTGCCAAGCAAAATCTGGTATGGGAAAAACTGCTGTTTTTGTCCTTTCAACCCTGCAACAAATTGAGCCTGTAGCTGGTCAAGTAGCTGCCCTTGTTTTATGTCACACAAGAGAATTAGCTTATCAGATCTGCCATGAGTTTGAAAGATTCAGCACTTATTTAACTGATATCAAGGTAGCTGTCTTTTATGGTGGTGTCAACATCAAGATTCACAAGGAGCTTCTCAAAAATGAATGCCCTCATATTGTTGTTGGGACACCTGGAAGGATTCTTGCACTTGCTAGGGACAAAGATCTTGCTTTGAAGAGTGTGAGGCATTTTATACTTGATGAATGTGACAAGATGCTTGAGTCACTCGACATGAGGAGAGATGTGCAAGAAATTTTCAAGATGACACCACATGACAAACAAGTAATGATGTTTTCAGCAACTTTAAGCAAGGAGATTCGACCAGTCTGCAAAAAGTTCATGCAAGATCCAATGGAAATTTATGTGGATGATGAAGCCAAGTTGACTCTTCATGGTCTTGTACAGCACTACATCAAATTGAGTGAGCTGGAGAAGAATCGAAAGCTGAATGATCTGCTGGATGCGTTAGATTTCAATCAGGTTGTGATATTTGTGAAAAGTGTAAGCAGAGCAGCTGAGCTCAACAAGTTGCTTGTGGAATGTAACTTTCCATCAATCTGCATCCACTCTGGCATGTCTCAGGAAGAAAGGTTGACTCGTTACAAGGGCTTCAAGGAAGGACACAAGAGAATCTTGGTGGCAACTGATTTAGTTGGAAGGGGTATTGATATTGAACGTGTAAACATTGTCATAAACTATGACATGCCAGATTCTGCTGACACTTATCTCCACCGTGTGGGTAGAGCTGGAAGGTTCGGAACAAAAGGTCTTGCCATCACTTTTGTGTCATCTGCAGCCGACTCTGATGTTCTTAACCAGGTTCAGGAGAGATTTGAGGTTGATATCAAAGAGCTTCCTGAGCAGATTGATACGTCAACATATATGCCATCGTAG
Protein:  
MGETEMKDTDAYEEELLDYEEEDEKAPDSAGVKVNGEAVKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIEPVAGQVAALVLCHTRELAYQICHEFERFSTYLTDIKVAVFYGGVNIKIHKELLKNECPHIVVGTPGRILALARDKDLALKSVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGHKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSAADSDVLNQVQERFEVDIKELPEQIDTSTYMPS